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<base href="http://fiji.sc/bugzilla/" />
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<body><table border="1" cellspacing="0" cellpadding="8">
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<th>Bug ID</th>
<td><a class="bz_bug_link
bz_status_NEW "
title="NEW - The align rgb planes plug in does not work"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=1043">1043</a>
</td>
</tr>
<tr>
<th>Summary</th>
<td>The align rgb planes plug in does not work
</td>
</tr>
<tr>
<th>Product</th>
<td>Fiji
</td>
</tr>
<tr>
<th>Version</th>
<td>unspecified
</td>
</tr>
<tr>
<th>Hardware</th>
<td>Macintosh
</td>
</tr>
<tr>
<th>OS</th>
<td>Mac OS
</td>
</tr>
<tr>
<th>Status</th>
<td>NEW
</td>
</tr>
<tr>
<th>Severity</th>
<td>normal
</td>
</tr>
<tr>
<th>Priority</th>
<td>P4
</td>
</tr>
<tr>
<th>Component</th>
<td>Plugins
</td>
</tr>
<tr>
<th>Assignee</th>
<td>imagej-bugs@imagej.net
</td>
</tr>
<tr>
<th>Reporter</th>
<td>jeff.spector@nih.gov
</td>
</tr>
<tr>
<th>CC</th>
<td>jeff.spector@nih.gov
</td>
</tr></table>
<p>
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<pre>When I load an image and run the "align RGB planes" plugin (downloaded from
your website) the text in the imageJ bar flashes very quickly (so fast I can
not read it) and then nothing happens and the plugin does nothing.
I installed the same plugin files to a "regular" imageJ and the plugin worked
perfectly (I tested it using the same image)
so something is causing it to not work when using FIJI.
If it helps, when I run it in FIJI the align rgb planes GUI never appears...
Information about your version of Java:
os.arch => x86_64
os.name => Mac OS X
os.version => 10.8.5
java.version => 1.6.0_65
java.vendor => Apple Inc.
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.6.0_65-b14-462-11M4609
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 20.65-b04-462
java.vm.vendor => Apple Inc.
java.vm.info => mixed mode
java.awt.graphicsenv => apple.awt.CGraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.6
sun.cpu.endian => little
sun.desktop => null
file.separator => /
The up-to-date check says: CHECK_TURNED_OFF
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to: null
imagej.dir => /Applications/Fiji.app
Information about the version of each plugin:
Activated update sites:
ImageJ: <a href="http://update.imagej.net/">http://update.imagej.net/</a> (last check:20150328005348)
Fiji: <a href="http://fiji.sc/update/">http://fiji.sc/update/</a> (last check:20150324232333)
Files not up-to-date:
b732dbf2 (MODIFIED) 20150213144220 Contents/Info.plist
bdc88860 (LOCAL_ONLY) 20140611190441 jars/MultipleKymograph_.class
6128cb23 (LOCAL_ONLY) 20140611190442 jars/MultipleOverlay_ (2).class
07c683b2 (LOCAL_ONLY) 20140611190442 jars/StackDifference_ (2).class
8821a474 (LOCAL_ONLY) 20140611190443 jars/WalkingAverage_ (2).class
1ad3be0d (LOCAL_ONLY) 20131114111332 jars/jpedalSTD.jar
8f675b7b (LOCAL_ONLY) 20080612095048 plugins/Align_RGB_planes.class
455de238 (LOCAL_ONLY) 20141110190011 plugins/Jama-1.0.3 copy.jar
a5d02cb7 (LOCAL_ONLY) 20140612120910 plugins/Kymo_graph1001.jar
aa5aa145 (LOCAL_ONLY) 20140619180813 plugins/MMReader_.jar
946ffba8 (LOCAL_ONLY) 20140611190441 plugins/MultipleKymograph_.class
1cc35aff (LOCAL_ONLY) 20140611194446 plugins/MultipleOverlay_ (2).class
8fb74bae (LOCAL_ONLY) 20140611190442 plugins/MultipleOverlay_class.class
77bb5c2d (LOCAL_ONLY) 20141110083600 plugins/SpeckleLib.jar
87786c25 (LOCAL_ONLY) 20140611194503 plugins/StackDifference_ (2).class
98992cd2 (LOCAL_ONLY) 20140611190442 plugins/StackDifference_class.class
d3721d57 (LOCAL_ONLY) 20140611190443 plugins/WalkingAverage_.class</pre>
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</p>
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