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<body><span class="vcard"><a class="email" href="mailto:hinerm@gmail.com" title="Mark Hiner <hinerm@gmail.com>"> <span class="fn">Mark Hiner</span></a>
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<a class="bz_bug_link
bz_status_NEW "
title="NEW - Bioformats Plugin, problem opening .czi files"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=950">bug 950</a>
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<th>What</th>
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<td style="text-align:right;">CC</td>
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<td>hinerm@gmail.com
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<b><a class="bz_bug_link
bz_status_NEW "
title="NEW - Bioformats Plugin, problem opening .czi files"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=950#c1">Comment # 1</a>
on <a class="bz_bug_link
bz_status_NEW "
title="NEW - Bioformats Plugin, problem opening .czi files"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=950">bug 950</a>
from <span class="vcard"><a class="email" href="mailto:hinerm@gmail.com" title="Mark Hiner <hinerm@gmail.com>"> <span class="fn">Mark Hiner</span></a>
</span></b>
<pre>Hi Christopher,
Thank you for taking the time to report this issue. The Bio-Formats importer
is managed by the OME team; they have a separate system for issue tracking and
resolution. See:
<a href="http://www.openmicroscopy.org/site/support/bio-formats5/about/bug-reporting.html">http://www.openmicroscopy.org/site/support/bio-formats5/about/bug-reporting.html</a>
for instructions on reporting bugs.
As a side note, I would point out that Bio-Formats uses a fixed 5-dimensional
(XYZCT) data model, employing a modulo system for representing higher
dimensions (e.g. ideally it would use modulo along C to track illumination in
your dataset). But my understanding is that you would not see a dedicated
"Illumination" axis using Bio-Formats right now.
SCIFIO does can do arbitrary axes for N-D data, but would use Bio-Formats
anyway for CZI support.
But it does still sound like 1) and 3) are bugs that should be reported.</pre>
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