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<base href="http://fiji.sc/bugzilla/" />
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<body><table border="1" cellspacing="0" cellpadding="8">
<tr>
<th>Bug ID</th>
<td><a class="bz_bug_link
bz_status_NEW "
title="NEW - Fiji error importing image sequence"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=885">885</a>
</td>
</tr>
<tr>
<th>Summary</th>
<td>Fiji error importing image sequence
</td>
</tr>
<tr>
<th>Product</th>
<td>Fiji
</td>
</tr>
<tr>
<th>Version</th>
<td>unspecified
</td>
</tr>
<tr>
<th>Hardware</th>
<td>Macintosh
</td>
</tr>
<tr>
<th>OS</th>
<td>Mac OS
</td>
</tr>
<tr>
<th>Status</th>
<td>NEW
</td>
</tr>
<tr>
<th>Severity</th>
<td>normal
</td>
</tr>
<tr>
<th>Priority</th>
<td>P4
</td>
</tr>
<tr>
<th>Component</th>
<td>Plugins
</td>
</tr>
<tr>
<th>Assignee</th>
<td>imagej-bugs@imagej.net
</td>
</tr>
<tr>
<th>Reporter</th>
<td>david.knecht@uconn.edu
</td>
</tr>
<tr>
<th>CC</th>
<td>david.knecht@uconn.edu
</td>
</tr></table>
<p>
<div>
<pre>Fiji gives an error message when importing a micro-manager generated folder of
images using File/Import/Image Sequence. It only happens if ImageJ2 use SCIFIO
is checked.
Information about your version of Java:
os.arch => x86_64
os.name => Mac OS X
os.version => 10.9.4
java.version => 1.6.0_65
java.vendor => Apple Inc.
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.6.0_65-b14-462-11M4609
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 20.65-b04-462
java.vm.vendor => Apple Inc.
java.vm.info => mixed mode
java.awt.graphicsenv => apple.awt.CGraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.6
sun.cpu.endian => little
sun.desktop => null
file.separator => /
The up-to-date check says: REMIND_LATER
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to: null
imagej.dir => /Applications/Fiji.app
Information about the version of each plugin:
Activated update sites:
ImageJ: <a href="http://update.imagej.net/">http://update.imagej.net/</a> (last check:20140802115300)
Fiji: <a href="http://fiji.sc/update/">http://fiji.sc/update/</a> (last check:20140730150634)
LOCI: <a href="http://dev.loci.wisc.edu/fiji/">http://dev.loci.wisc.edu/fiji/</a> (last check:20140401145514)
OpenSPIM: <a href="http://openspim.org/update/">http://openspim.org/update/</a> (last check:20140630095101)
ScientiFig: <a href="http://sites.imagej.net/Aigouy/">http://sites.imagej.net/Aigouy/</a> (last check:20140806102638)
Stowers: <a href="http://research.stowers.org/imagejplugins/updates/">http://research.stowers.org/imagejplugins/updates/</a> (last
check:20140805114656)
Files not up-to-date:
ed946ffd (MODIFIED) 20140707150311 Contents/Info.plist
5aaef494 (MODIFIED) 20140807131355 jars/bio-formats/formats-api.jar
28a6e894 (MODIFIED) 20140807131357 jars/bio-formats/formats-bsd.jar
a6f52489 (MODIFIED) 20140805112433 jars/bio-formats/formats-common.jar
5d3f4991 (MODIFIED) 20140807131359 jars/bio-formats/formats-gpl.jar
763477d8 (MODIFIED) 20140805112435 jars/bio-formats/jai_imageio.jar
fcadebc0 (MODIFIED) 20140805112435 jars/bio-formats/mdbtools-java.jar
3b60db12 (MODIFIED) 20140805112435 jars/bio-formats/metakit.jar
b6d5fe26 (MODIFIED) 20140805112435 jars/bio-formats/ome-poi.jar
3d9d9b1a (MODIFIED) 20140805112436 jars/bio-formats/ome-xml.jar
9ae3dd1b (OBSOLETE) 20140805112432 jars/slf4j-log4j12-1.7.2.jar
4f857c40 (LOCAL_ONLY) 20140413145817 macros/FWHM_Line.ijm
10be5746 (LOCAL_ONLY) 20140729151030 macros/float stack macros.txt
ee910016 (LOCAL_ONLY) 20140418174330 plugins/Macros/FWHM_Line.ijm
948cfd99 (LOCAL_ONLY) 20140205160023 plugins/NL_Means_1.0.jar
d08414c1 (LOCAL_ONLY) 20140415104556 plugins/Neuron_Growth.jar
91fcf2c4 (LOCAL_ONLY) 20140418134827 plugins/RGB_Measure.class
d1c9ab2c (LOCAL_ONLY) 20140204163744 plugins/SaveAsMovie_mac64.jar
572ab775 (LOCAL_ONLY) 20140729152027 plugins/Stack_Deflicker.class
896ab4ae (MODIFIED) 20140807131400 plugins/bio-formats_plugins.jar</pre>
</div>
</p>
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