[ImageJ-bugs] [Bug 1181] New: When dragging and dropping an IJ1 macro into FIJI an error pops up in the console

bugzilla at fiji.sc bugzilla at fiji.sc
Mon Nov 2 12:40:22 CST 2015 

http://fiji.sc/bugzilla/show_bug.cgi?id=1181

            Bug ID: 1181
           Summary: When dragging and dropping an IJ1 macro into FIJI an
                    error pops up in the console
           Product: Fiji
           Version: unspecified
          Hardware: PC
                OS: Windows
            Status: NEW
          Severity: normal
          Priority: P4
         Component: Plugins
          Assignee: imagej-bugs at imagej.net
          Reporter: nick.galati80 at gmail.com
                CC: nick.galati80 at gmail.com

The following error pops up when I drag and drop an IJ1 macro into FIJI. It is
a complex macro with 1000 lines and many user-defined functions. The error does
not pop up when I open simple IJ1 macros with a few lines of built in ImageJ
macro functions.

The macro does run fine, so I am simply reporting the error message.

Thanks.



java.lang.NullPointerException
    at
org.fife.ui.rsyntaxtextarea.TokenMakerBase.getLastTokenTypeOnLine(TokenMakerBase.java:221)
    at
org.fife.ui.rsyntaxtextarea.RSyntaxDocument.updateSyntaxHighlightingInformation(RSyntaxDocument.java:660)
    at
org.fife.ui.rsyntaxtextarea.RSyntaxDocument.setSyntaxStyle(RSyntaxDocument.java:543)
    at
org.fife.ui.rsyntaxtextarea.RSyntaxTextArea.setSyntaxEditingStyle(RSyntaxTextArea.java:2792)
    at net.imagej.ui.swing.script.EditorPane.setLanguage(EditorPane.java:490)
    at net.imagej.ui.swing.script.EditorPane.setLanguage(EditorPane.java:435)
    at
net.imagej.ui.swing.script.EditorPane.setLanguageByFileName(EditorPane.java:423)
    at net.imagej.ui.swing.script.EditorPane.setFileName(EditorPane.java:369)
    at
net.imagej.ui.swing.script.TextEditor.setEditorPaneFileName(TextEditor.java:1666)
    at net.imagej.ui.swing.script.TextEditor.open(TextEditor.java:1368)
    at
net.imagej.legacy.plugin.DefaultLegacyEditor.open(DefaultLegacyEditor.java:93)
    at
net.imagej.legacy.DefaultLegacyHooks.openInEditor(DefaultLegacyHooks.java:298)
    at ij.plugin.Compiler.edit(Compiler.java:46)
    at ij.plugin.Compiler.run(Compiler.java:33)
    at ij.IJ.runPlugIn(IJ.java:182)
    at ij.Executer.runCommand(Executer.java:132)
    at ij.Executer.run(Executer.java:65)
    at java.lang.Thread.run(Thread.java:662)
Exception in thread "AWT-EventQueue-0"
java.lang.ArrayIndexOutOfBoundsException: 30
    at
org.fife.ui.rsyntaxtextarea.DefaultTokenFactory.createToken(DefaultTokenFactory.java:118)
    at
org.fife.ui.rsyntaxtextarea.TokenMakerBase.addToken(TokenMakerBase.java:132)
    at
net.imagej.ui.swing.script.highliters.ImageJMacroTokenMaker.addToken(ImageJMacroTokenMaker.java:2428)
    at
net.imagej.ui.swing.script.highliters.ImageJMacroTokenMaker.addToken(ImageJMacroTokenMaker.java:2411)
    at
net.imagej.ui.swing.script.highliters.ImageJMacroTokenMaker.addToken(ImageJMacroTokenMaker.java:2400)
    at
net.imagej.ui.swing.script.highliters.ImageJMacroTokenMaker.yylex(ImageJMacroTokenMaker.java:2756)
    at
net.imagej.ui.swing.script.highliters.ImageJMacroTokenMaker.getTokenList(ImageJMacroTokenMaker.java:2469)
    at
org.fife.ui.rsyntaxtextarea.RSyntaxDocument.getTokenListForLine(RSyntaxDocument.java:428)
    at org.fife.ui.rsyntaxtextarea.SyntaxView.paint(SyntaxView.java:721)
    at javax.swing.plaf.basic.BasicTextUI$RootView.paint(BasicTextUI.java:1422)
    at javax.swing.plaf.basic.BasicTextUI.paintSafely(BasicTextUI.java:722)
    at org.fife.ui.rtextarea.RTextAreaUI.paintSafely(RTextAreaUI.java:536)
    at javax.swing.plaf.basic.BasicTextUI.paint(BasicTextUI.java:869)
    at javax.swing.plaf.basic.BasicTextUI.update(BasicTextUI.java:848)
    at
org.fife.ui.rtextarea.RTextAreaBase.paintComponent(RTextAreaBase.java:728)
    at
org.fife.ui.rsyntaxtextarea.RSyntaxTextArea.paintComponent(RSyntaxTextArea.java:2017)
    at javax.swing.JComponent.paint(JComponent.java:1029)
    at javax.swing.JComponent.paintChildren(JComponent.java:862)
    at javax.swing.JComponent.paint(JComponent.java:1038)
    at javax.swing.JViewport.paint(JViewport.java:747)
    at javax.swing.JComponent.paintChildren(JComponent.java:862)
    at javax.swing.JComponent.paint(JComponent.java:1038)
    at javax.swing.JComponent.paintChildren(JComponent.java:862)
    at javax.swing.JSplitPane.paintChildren(JSplitPane.java:1030)
    at javax.swing.JComponent.paint(JComponent.java:1038)
    at javax.swing.JComponent.paintChildren(JComponent.java:862)
    at javax.swing.JComponent.paint(JComponent.java:1038)
    at javax.swing.JComponent.paintChildren(JComponent.java:862)
    at javax.swing.JComponent.paint(JComponent.java:1038)
    at javax.swing.JComponent.paintChildren(JComponent.java:862)
    at javax.swing.JComponent.paint(JComponent.java:1038)
    at javax.swing.JLayeredPane.paint(JLayeredPane.java:567)
    at javax.swing.JComponent.paintChildren(JComponent.java:862)
    at javax.swing.JComponent.paintToOffscreen(JComponent.java:5131)
    at
javax.swing.RepaintManager$PaintManager.paintDoubleBuffered(RepaintManager.java:1479)
    at javax.swing.RepaintManager$PaintManager.paint(RepaintManager.java:1410)
    at javax.swing.RepaintManager.paint(RepaintManager.java:1224)
    at javax.swing.JComponent.paint(JComponent.java:1015)
    at java.awt.GraphicsCallback$PaintCallback.run(GraphicsCallback.java:21)
    at sun.awt.SunGraphicsCallback.runOneComponent(SunGraphicsCallback.java:60)
    at sun.awt.SunGraphicsCallback.runComponents(SunGraphicsCallback.java:97)
    at java.awt.Container.paint(Container.java:1780)
    at java.awt.Window.paint(Window.java:3375)
    at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:796)
    at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:713)
    at javax.swing.RepaintManager.seqPaintDirtyRegions(RepaintManager.java:693)
    at
javax.swing.SystemEventQueueUtilities$ComponentWorkRequest.run(SystemEventQueueUtilities.java:125)
    at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
    at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:642)
    at java.awt.EventQueue.access$000(EventQueue.java:85)
    at java.awt.EventQueue$1.run(EventQueue.java:603)
    at java.awt.EventQueue$1.run(EventQueue.java:601)
    at java.security.AccessController.doPrivileged(Native Method)
    at
java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
    at java.awt.EventQueue.dispatchEvent(EventQueue.java:612)
    at
java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
    at
java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
    at
java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
    at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
    at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
    at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)

Information about your version of Java:

  os.arch => amd64
  os.name => Windows NT (unknown)
  os.version => 6.2
  java.version => 1.6.0_24
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_24-b07
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 19.1-b02
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => windows
  file.separator => \

The up-to-date check says: REMIND_LATER

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to:
C:\Users\Nick\Desktop\FIJI~1.APP/java/win64/jdk1.6.0_24//jre
  imagej.dir => C:\Users\Nick\Desktop\FIJI~1.APP

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20151026135651)
Fiji: http://update.fiji.sc/ (last check:20151028093859)
3D ImageJ Suite: http://sites.imagej.net/Tboudier/ (last check:20151008005610)

Files not up-to-date:
  8cb8d89b (LOCAL_ONLY) 20151102112105 plugins/quickhull3d.jar

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