Presentations

Revision as of 09:38, 1 October 2015 by Rueden (talk | contribs) (Posters: Add poster links)

Contents

Talks

Date Presenter Title Resources
2015 ImageJ Conference
Keynotes
2015-Sep-03 {{{1}}} Introduction to ImageJ

video

2015-Sep-03 Curtis Rueden ImageJ2 and Fiji: The ImageJ2 platform, and the Fiji distribution of ImageJ

video, slides

2015-Sep-04 {{{1}}} Microscope control and image acquisition with Micro-Manager

video

2015-Sep-04 {{{1}}} Getting stuff done – Software synergy with ImageJ + KNIME

video

Featured presentations
2015-Sep-04 {{{1}}} Sharing the value of software freedom with non-programmers

video, transcript, abstract

2015-Sep-04 Tiago Ferreira Alternative approaches for neuronal morphometry

video, abstract

2015-Sep-03 {{{1}}} The Thin Plate Spline method for smooth non-rigid transformations

video, slides, abstract

Lightning talks
2015-Sep-04 Anne Alerding Quantifying soybean stem tissues using common tools in ImageJ & Fiji

video, abstract

2015-Sep-03 Fabrice de Chaumont Yet another ImageJ friend: Icy

video, abstract

2015-Sep-03 Jesus Manuel Falagan Plugins to import, visualize, process & write astronomical FITS files

video, abstract

2015-Sep-04 Bill Heeschen Quantitative characterization of cellular irregularities in extruded polystyrene foam using digital image processing and analysis

video, slides (PDF), slides (PPTX), macro, abstract

2015-Sep-03 Mark Hiner ImageJ+MATLAB: Reunited

video, slides, abstract

2015-Sep-04 Irene Landrum SWAMP – a no-cost, open, high-performance computing platform for continuous software assurance

video, slides, abstract

2015-Sep-03 Melissa Linkert OME Bio-Formats: 10 years of proprietary image data

video, slides, abstract

2015-Sep-03 Michael Majurski Accurate and scalable Microscopy Image Stitching Tool (MIST)

video, abstract

2015-Sep-04 Benjamin Nanes Slide Set: Simplified batch processing with ImageJ2

video, abstract

2015-Sep-04 {{{1}}} Flexible Deconvolution using ImageJ Ops

video, slides, abstract

2015-Sep-04 Stephan Saalfeld Seamless stitching without blending

video, abstract

2015-Sep-04 Raghavender Sahdev TimeLapseReg – An ImageJ plugin for drift correction of video sequence in time-lapse microscopy

video, abstract

2015-Sep-04 Benjamin Schmid Real-time multi-view deconvolution of time-lapse data on the GPU

video, abstract

2015-Sep-04 Amitabh Verma Acquisition, processing & re-processing using OpenPolScope plugin for Micro-Manager

video, abstract

2015-Sep-04 Thorsten Wagner NanoTrackJ – An open-source multi-modal size characterization tool for nanoparticle tracking analysis based on ImageJ

video, slides, abstract

2015-Sep-04 Petr Walczysko The Open Microscopy Environment (OME)

video, abstract

2015-Sep-04 Jay Warrick JEX – a platform for data management and batch processing with standard tools

video, abstract

2015-Sep-03 Aryeh Weiss Automated processing of telomeres with ImageJ and R

video, slides abstract

Workshops
2015-Sep-03 Aryeh Weiss An introduction to digital image processing

video, slides, data, abstract

2015-Sep-03 Jan Brocher Image processing, feature extraction and analysis using the BioVoxxel Toolbox

video, slides, abstract

2015-Sep-03 Tiago Ferreira Scripting with BAR

video, abstract

2015-Sep-03 Dominik Lindner
Petr Walczysko
The OMERO platform for management of microscopy data and beyond

video, abstract

2015-Sep-03 Fabrice de Chaumont
Stephane Dallongeville
Hands on Icy !

video, abstract

2015-Sep-03 Matt McCormick SimpleITK

video, interactive, abstract

2015-Sep-04 Curtis Rueden
{{{1}}}
ImageJ2 scripts: Parameters + ImageJ Ops

video 1, video 2, slides, abstract

2015-Sep-04 Marcel Austenfeld Statistical image analysis and reproducible reports with ImageJ and R

video, abstract

2012 ImageJ Conference
2012-Oct-24 Curtis Rueden ImageJ2

slides

2010 ImageJ Conference
2010-Oct-27 Curtis Rueden ImageJDev

slides

Other presentations
2015-Jan-12 Johannes Schindelin The ImageJ Ops Framework: Image processing made easy

slides

Posters

Date Presenter Title Resources
2015 ImageJ Conference
2015-Sep-03 Ignacio Arganda-Carreras Trainable Weka Segmentation: a tool for machine-learning-based image segmentation

poster abstract

2015-Sep-03 Karl Bellve Design and implementation of 3D focus stabilization for fluorescence microscopy

abstract

2015-Sep-03 Jan Brocher The BioVoxxel Toolbox

poster abstract

2015-Sep-03 Matthew Caputo Size distribution of metal particles for additive manufacturing using image analysis techniques by ImageJ

abstract

2015-Sep-03 Sherry Clendenon Image Acquisition and Processing for Cell Based Model Instantiation and Validation

abstract

2015-Sep-03 Fabrice de Chaumont Icy: an open source software for image analysis

abstract

2015-Sep-03 Olaya Fernandez-Gayol Using the wrMTrck plugin to analyze the Morris Water maze in mice

poster abstract

2015-Sep-03 Andreas Jahnen Segmentation of intracranial aneurysms in 2D Digital Subtraction Angiography (DSA) images using ImageJ Tools and Plugins

abstract

2015-Sep-03 David Legland MorphoLibJ: an integrated library for morphological filtering, segmentation and analysis of plant tissues

abstract

2015-Sep-03 David Logan The ImageJ-CellProfiler Interface

poster abstract

2015-Sep-03 Michael Majurski Accurate and scalable Microscopy Image Stitching Tool (MIST)

abstract

2015-Sep-03 Jeffrey Murphy Untitled

abstract

2015-Sep-03 Kelsey Nemec Untitled

abstract

2015-Sep-03 John Parrish Sperm nuclear shape and texture analysis

abstract

2015-Sep-03 Tobias Pietzsch BigDataViewer—Visualization and Image Processing for Terabyte Data Sets

poster abstract

2015-Sep-03 Stephan Saalfeld ImgLib2 for visualization and generic image processing

poster abstract

2015-Sep-03 Md Abdul Kader Sagar The SLIM Curve plugin for lifetime image analysis

abstract

2015-Sep-03 Raghavender Sahdev TimeLapseReg – An ImageJ plugin for drift correction of video sequence in time-lapse microscopy

abstract

2015-Sep-03 Joey Tidei Untitled

poster abstract

2015-Sep-03 Jean-Yves Tinevez TrackMate

abstract

2015-Sep-03 Amitabh Verma Acquisition, Processing & Re-Processing using OpenPolScope plugin for Micro-Manager

abstract

2015-Sep-03 Thorsten Wagner Tools and methods of the Biomedical Imaging Group for ImageJ: An Overview

poster abstract